Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------MAQQTMGGAGAASTIDINPDEMTHIAKELLAIANEFEGVIKPAVNQLKANKYLTKGKAKKAMDKVPKANERVM-------ELQDQYNMASSVVFDILQTMVDA--DRDIAEKIIAALEV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4AKK Chain:A ((36-418)) | PEVVDWFARARRLQKQQLHQLAQQGTLAGQISALVHMLQCERGASNIWLCSGGRLYAAECRAGAALVDEQLTRFYAALEPARDAASSALCWRIACAVWYLPQLAALRKRVRDREIAAEEATGQFSRIIRHLLNIVPQLNDSIDDPQIAGRMVALYSFMQGKELAGQERALGALGFARGQFSDELRQQLVDRIDGQQPCFDSFQALAQPPQTALFAEQCQASLEIEQLRRVACTRQPPADEGETALRWFCAQTQRLEQLRGVEELLIVDLLNAADALLEGSIALRLDKQLLPLVRQQAHELQQLSGQLASLKDALEERKLIEKAKSVLMTYQGMQEEQAWQALRKMAMDKNQRMVEIARALLTVKALWR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4AKK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -18662 for 671 contacts (-27.8/contact) +
2D Compatibility (PS) -11929 + (NN) -6496 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -40737.0 ( -60.71 by residue)
QMean score : 0.510
|
|
|