Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGDFMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVIRYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDYRKDSELQKKRSNLGLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIF----PEQLFTAYCKFKFKEFHIEE |
| 1Q5Q Chain:A ((9-235)) | ---AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAE-------NPSTALHKVSELYDRLGFAAVG---------------KYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALRQGGVDVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254071 for 1769 contacts (-143.6/contact) +
2D Compatibility (PS) -21950 + (NN) 7410 + (LL) 2548
1D Compatibility (HY) 6400 + (ID) 950
Total energy: -260613.0 ( -147.32 by residue)
QMean score : 0.106
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