Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDLEQIYILDFTMGLRFHPLIIRKNLPLLYVAFIFLIWIQG-----------VVMAGLPGDFDTTELDVLLAAIPALPLLILYPKKMAMKFQNVQYLLYVCFN
3T56 Chain:A ((905-965))
---------------------LLIISSVPFALVGGIWLLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3T56.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20907 for 228 contacts (-91.7/contact) +
2D Compatibility (PS) -5269 + (NN) -2647 + (LL) 4336
1D Compatibility (HY) -7200 + (ID) 900
Total energy: -32587.0 ( -142.93 by residue)
QMean score : 0.019
(partial model without unconserved sides chains):
PDB file :
Tito_3T56.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T56-query.scw
PDB file :
Tito_Scwrl_3T56.pdb
: