Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSSYAIAESLGAVDGEHLTFDEMFSVISRIAENVSLPLTVDIETGYARNLEELAQNVERLLAIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIKTIKETAAKMSTEIFINARTDVFFQGRDEAVD--LVEEAISRANAYKEAGADAIFIPGLLSPNLIRAFVEKSPLPVNVMRMDGMLSNEDLQKIGVKRISYGPFSFFQANLAIQQEVERIFEGGKAL
4MG4 Chain:C ((18-249))
-------FRSLHRAGQPLALFNVWDAGSARVVADAGAVALATGSWSVAAANGFVDGEQMPRALMMEVLERIVRATDLPVTVDLESGYGERPEDVAETIAMSIRAGAIGCNLEDSFPSTGE--LRDVDEAAARIAAARQAADRAGVDYFINARTDVFFKAATETHDERLLDATLARARAYAAAGADGLFVPGLRSPALIRALTAASPLPVNVMRVAETPTLAELAEYGVARISHGPYPYLQA------------------
General information:
TITO was launched using:
RESULT:
Template:
4MG4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151454 for 2008 contacts (-75.4/contact) +
2D Compatibility (PS) -25258 + (NN) -10726 + (LL) 1856
1D Compatibility (HY) -15200 + (ID) 4850
Total energy: -205632.0 ( -102.41 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_4MG4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MG4-query.scw
PDB file :
Tito_Scwrl_4MG4.pdb
: