Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSSIDQARKTIKALNSTYKIVHVTELATLGKLSALREKAEAAVSYYETILKSLRWVR-------KTMYTSNNQIKEEKNVTAIAITSERGLCGAYNSEVFAEIDQLIESLGD-QVTINWVVVGEQGHRYLTKLGQNITSYLQFSLENIDLETTTAVTADFIDLIHSEQMDALYVIFTKYLNAVQSEAMCEKIYPEIPEDSDTE-LIEVDYVLDFETDDEQVEQLLLENYLCGLLYSMFRYSVASEYCMRRIAMKQAKDNIQKQLEEAIFDARKQALQQKTGELLDIISGAQTIRKDEE |
| 3OAA Chain:G ((1-284)) | -AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLED----RDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYL--YEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130768 for 2045 contacts (-63.9/contact) +
2D Compatibility (PS) -29725 + (NN) -13793 + (LL) 992
1D Compatibility (HY) -12800 + (ID) 3200
Total energy: -189294.0 ( -92.56 by residue)
QMean score : 0.572
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