Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEKIELSKRDRLRVAWRSTFIQGSWNYERMQNGGWAFSMIPAIKKLYKTKEDRSQALKRHLEFFNTHPYIASPILGVTLALEEERANGAEVDDVAIQGVKVGMMGPLAGVGDPVFWFTIRPMLGALGASLALSGNILGPILFFVAWNVIRWGFMW--YTQEFGYKAGSKITDDLSGGLLQDITKGASILGMFVLAALVQRWVNIQFAPIISKVKLDEGAYIDWSHLPQGAQGIKTALEQQQAGLALSEIKVTTLQNNLDNLIPGLAAVALTFLCMWLLKKKISPIIIILGLFVVGIVGHLIGLL |
3WUQ Chain:A ((3-265)) | --------TVDQVEELRRDLRIKSQELEVKNAAANDKLKKMVKDQQEAEKKKVMSQEIQEQLH--KQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPP------AAVKLALESICLLLGESTTD------WKQIRSIIMRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSY---------NYEIVNRASLACGPMVKWAI-AQLNYADMLKRVEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQAIKADLAAVEAKVN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42527 for 1735 contacts (-24.5/contact) +
2D Compatibility (PS) -27167 + (NN) -2104 + (LL) 4748
1D Compatibility (HY) -1200 + (ID) 1800
Total energy: -70050.0 ( -40.37 by residue)
QMean score : 0.236
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