Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYLNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDAGKEKLSSLVR-FNTRQNESSSAMILVFGDLQNFENGEKIYGESVERGLMPAEVKEQQMAKLSQYFASIPRSEAERVVLIDGGIVAMQLMLVARAHGYDTNPIGGFERTEVAEAFNMDPER-YVPVMIVSIGKAKNSGYQSYRLPITDVTTFA
3GE6 Chain:A ((5-212))
--QTATDFMEIVKGRRSIRNYDTNVKISKEEMTQILEEATLAPSSVNMQPWRFLVIDSEEGKATLAP-LAKFNQVQVETSSAVIAVFGDMKAIDQLENIYDTAVEKGLMPQEVRDRQVPAIQGMYENVPASALKDSILIDSGLVSMQLMLVARAHGYDTNPIGGYEKDQIAEAFGME-KDRYVPVMLLSIGKAVDAGYPSVRLPINDIADWK
General information:
TITO was launched using:
RESULT:
Template:
3GE6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79138 for 1476 contacts (-53.6/contact) +
2D Compatibility (PS) -22524 + (NN) -12140 + (LL) 296
1D Compatibility (HY) -24400 + (ID) 5600
Total energy: -143506.0 ( -97.23 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_3GE6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE6-query.scw
PDB file :
Tito_Scwrl_3GE6.pdb
: