Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQGLTVNRSKDSIEITSKDTVGGWKSKIGGMKEWSIENDGLYVADAESH---KELAKYFESDSPVCVKIINQASKKGLFGGLAIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQMPGETPVAPAE |
2BPT Chain:A ((584-667)) | ----------------------------------------------IRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADIS------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5795 for 523 contacts (11.1/contact) +
2D Compatibility (PS) -7944 + (NN) 3010 + (LL) 5528
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -261.0 ( -0.50 by residue)
QMean score : 0.059
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