Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKTIWDQKESTAGAEQKANTALNSAKDYVDTIGEGTVIFKGANLMGAGQSFKWDASKLKFGMTLLFSRYDAANNTPQDYYYHSVFLSKAQLVELAGKGILVQMPSTTYGDRKYLYVSTTGLSGHFDNSNYAAWALRQVTIM |
4U7O Chain:A ((25-68)) | ---------------------------------VTEQQKIDNDRKQFVSNVSHELRTPLTSLRSYIEALSDG---------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7627 for 148 contacts (51.5/contact) +
2D Compatibility (PS) -4135 + (NN) 50 + (LL) 9488
1D Compatibility (HY) -1200 + (ID) 500
Total energy: 11330.0 ( 76.55 by residue)
QMean score : 0.461
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