Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDAS--GSPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKGTNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHVPALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNG-------------------LVGKTRIVQSYNNGKAFSDVTGELDKTTGDFVSPPDAKITYNTR-SVTPNADITAVTEDAKSRIEGVINETIGLA-NKDVISRDTNPDNKAIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQQYLS---NQTYFLQISGLKYTFTDTDDLDHAYKVASVTTED----GTPLKTDQKYKVVINDFLFGGGDGFSAFKKAN--LVTAIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 2Z1A Chain:A ((28-534)) | --------------------------------------FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWA----RA-----KNPLFLDAGDVFQGTLY-FNQYRGLADRYFMHRLRYRAMALGNHEFDLGPGPLADFLKG-----------------ARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPG--PTVAFLDPYESAQKAVYELLAKGVNKIVVLSHLGYGED---------------LKLARR------LVGVQVIVGGHSHTLLGSFPHKELSPAGPYPTVVKNPEGKDVLVVQAWEWGKVVGLLEVTFDAKGE--LLAYKGEALLMTPEAAPEDFFAKEALLAYAQPVMALMQQVIAEAKV--DLVGER----AVVRRRESNLGNLITDGMLWKTRN--AGTQIALQNGGGIRASIP------KGPITVGKVYEVLPFGNTLVVMDLKGKEILAALENGVSQWENTAGRFLQVSGLRYAFDLSRP---AGSRVVRVEVKTEKGYVPLDLEATYRVVVNNFIANGGDGFTVLKEAQGYRVDTGFSDAESFMDYLKEL----KVVEAGLEGRIEVLNEP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134983 for 4342 contacts (-31.1/contact) +
2D Compatibility (PS) -51454 + (NN) -16048 + (LL) 9952
1D Compatibility (HY) -26800 + (ID) 6600
Total energy: -225933.0 ( -52.03 by residue)
QMean score : 0.522
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