Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLKTATTILAPIDFFDDIVLLNATREMQDFVAETAIKQINQLGGRFSISINIPAHYVASSTYMTFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV
4Q6J Chain:A ((5-252))
-DISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLKTATTILAPIDFFDDIVLLNATREMQDFVAETAIKQINQLGGRFSISINIPAHYVASSTYMTFLHDYVKEHLKYPECLEIEIIER---TELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV
General information:
TITO was launched using:
RESULT:
Template:
4Q6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162846 for 1965 contacts (-82.9/contact) +
2D Compatibility (PS) -26483 + (NN) -9191 + (LL) 344
1D Compatibility (HY) -39600 + (ID) 12250
Total energy: -250026.0 ( -127.24 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_4Q6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q6J-query.scw
PDB file :
Tito_Scwrl_4Q6J.pdb
: