Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MEYKNGENRIYAVNDEGVEVGEVTFVPTGEDMFIIDHTGVDDAARGQGIAQELVKRAVEKAKSEGKKIVPLCPFAKAEFSKKPEYQEVEASK-------
1R57 Chain:A ((1-102))
MSNLEIKQGENKFYIGDDENNALAEITYRFVDNNEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLKIIASCSFAKHMLEKEDSYQDVYLGLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
1R57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24191 for 632 contacts (-38.3/contact) +
2D Compatibility (PS) -9992 + (NN) -6174 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 1750
Total energy: -48107.0 ( -76.12 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_1R57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R57-query.scw
PDB file :
Tito_Scwrl_1R57.pdb
: