Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKTIIKRVLQIIPMLFIISIISFALIKLAPGDPVNSFVTPDMNPDDVERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLVGTSLVLTLLLSIPLGLVAANYENTWIDKVLNGISYIGISIPIFWFGMILIDVFSIQLGWLPSL-----GMRTIGVDSFWDMAEHAILPVITLTFQGCAAYYRYVRSNTINQLKEEYVLFGYAKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVITGAFITESIFS-WPG-------------MGSLGINAIF----QLDYPVIMAITLFSALLLIIGNLLADLAYMIVDPRIREMG |
| 3RLF Chain:F ((272-503)) | -------------------------------------------------------------------------------------GIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEA-LRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKP---AWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAI-PDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAI----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141473 for 1402 contacts (-100.9/contact) +
2D Compatibility (PS) -21445 + (NN) -2685 + (LL) 8292
1D Compatibility (HY) -13600 + (ID) 1500
Total energy: -172411.0 ( -122.98 by residue)
QMean score : 0.150
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