Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTKNHRLPKKHLPIRKSTTRFTKGVVTVSRIDIGEIQTFAYQLHTANEAARKSIKDIKNAVKNYTEDGSLKGKAIDASKNYYQMTYFPLCDAIIEAMNESEERLAQYIADFHAQVDSSADARIDADGLYELGKMIDRIEAKKEALAQRMNTGTEGQMQSYRSQLSIAYKQENILEKYLAFEQSHGGFFDNLTDLVRGIQQTIRELQSNIQFNSKTGTYDMSKLNFTTVTRMQNASGKALNDNAKTFNFDEYQKTYRGQMWVLMKNGIVDVEATNAYNAAVLGGEMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFGIISGLIFRYTAGGYKGKKFKIPRDWLHRRKKNNGVEVGTDFGKIGKLVNHPNIKINWSEYAEHGMSRLKQR--GLSKSQVDDFVEHGKVLSQNEGEKFAFITEDGVAIVSKDGKLVTAWGKKDFDEGMKKIIGKLYGK--
1W9C Chain:A ((707-1027))-VIQLGRIYLDMLNVYKCLSENISAAIQAN----GEMVTKQPLIRSMRTVKRETLKLISGWVSRSND-----------PQMVAENFVPPLLDAVLIDYQRNVPAAR------------------EPEVLSTMAIIVNKLG---GHITAEIPQIFDAVFECTLNMINKDFEE---------YPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQ-EEAAAQSFYQTYFCDILQHIFSVVTDTS-------------HTAGLTMHASILAYMFNLVEEG----------------------------------------------------------KISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQD---------------------------IPAFKEHLRDFLVQIKEFAG


General information:
TITO was launched using:
RESULT:

Template: 1W9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 34178 for 2448 contacts (14.0/contact) +
2D Compatibility (PS) -31825 + (NN) 2088 + (LL) 8444
1D Compatibility (HY) -13600 + (ID) 2400
Total energy: -3115.0 ( -1.27 by residue)
QMean score : 0.312

(partial model without unconserved sides chains):
PDB file : Tito_1W9C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W9C-query.scw
PDB file : Tito_Scwrl_1W9C.pdb: