Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINSRFYEGFEGEAELSFVAGDNKLLIW----NGYFETILDNLLDCNVEREGVLKEYFNHEGWYDDSPWMIEDNSLTIIQ-LKCFDINKINQTSMKDDLEEVVKTIISFLENNRFSKIYIEYE
2GTL Chain:A ((62-137))
-------ESGEFKSHLVRVANGLKLLINLLDDTLVLQSHLGHLADQHIQRKGVTKEYFRGIG---------EAFARVLPQVLSCFNVDAWNR-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5966 for 311 contacts (-19.2/contact) +
2D Compatibility (PS) -7185 + (NN) -1641 + (LL) 3852
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -16240.0 ( -52.22 by residue)
QMean score : -0.037
(partial model without unconserved sides chains):
PDB file :
Tito_2GTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GTL-query.scw
PDB file :
Tito_Scwrl_2GTL.pdb
: