Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKFDLENGYVVKADGEML-----VGGKFVVFKDSMKNW------EPPYENKKLSESEVQ---EIIQQVKQSTNENTVQISFE
1T1H Chain:A ((244-321))
GSPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIE----
General information:
TITO was launched using:
RESULT:
Template:
1T1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7008 for 377 contacts (-18.6/contact) +
2D Compatibility (PS) -6479 + (NN) 862 + (LL) 412
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -14963.0 ( -39.69 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_1T1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T1H-query.scw
PDB file :
Tito_Scwrl_1T1H.pdb
: