Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIDSIMSKYNKQQVSKIKDFLLSEIDSDNIEETIDFVKSNNQEKMGKFQDILYDGGIYSGLFIEGNQYLISSSNRKVLIIDAVSEENGVDKELTRIECSLEDFTFLLRNIKDVLRYEEF
1WQA Chain:A ((218-277))
-------------------------EPNEENLKEFMEIVKA-----LGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEKG-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WQA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9039 for 334 contacts (-27.1/contact) +
2D Compatibility (PS) -6303 + (NN) -1694 + (LL) 4848
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -15088.0 ( -45.17 by residue)
QMean score : 0.080
(partial model without unconserved sides chains):
PDB file :
Tito_1WQA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WQA-query.scw
PDB file :
Tito_Scwrl_1WQA.pdb
: