Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDQKIKDIYHIDDSFSIDNEKYNKWLKSLLNKTRGEITENDVYTMLLQQELEDLAIEKAIEFIKIDPLAGEMWDGQFLEQLAGISVDKLVAYKEELQKLIPYMDNQINEILWDFETEKEEFLFRYAKFKDKVANL
1KBI Chain:A ((80-147))
---------------------------------------------------------------KLGPLQGSMPPELVCPPYAPGETKEDIARKEQLKSLLPPLDNIIN--LYDFEYLASQTLTKQA---------
General information:
TITO was launched using:
RESULT:
Template:
1KBI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3670 for 257 contacts (14.3/contact) +
2D Compatibility (PS) -6423 + (NN) -2033 + (LL) 6140
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -2546.0 ( -9.91 by residue)
QMean score : 0.280
(partial model without unconserved sides chains):
PDB file :
Tito_1KBI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KBI-query.scw
PDB file :
Tito_Scwrl_1KBI.pdb
: