Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDVKDSKGQVVGTATVKKATNQVTLVFSDYVEKHSDVKGELDFWTAFNQKVITGNETVDLVFPLENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVRVNYAKVNIPNAVFTDIIGAKQTLNFDSIKAFHGTYSADRVFTAGAPISSTNFSATSDGFSVALGNLTDSVQISYTTTTTDGGKSTQYDNTAKLAGTDFVTKQTSTWTPASGGGGEGGGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTIGENNQAITVTKENTLNTGSVELTKLDAATKATLAGATFELQDKEGNTLQTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVIAGETDQVVKVTKENTLEVGSVELTKLDSA-TKATLAGATFELQDKEGNTLQTDLKTDENGVLKVTDLVPGSYQF-------VETSAPTGYK-LDNSPVSF---EVVAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTL------QTGLTTDENGVLKVTDLVPGTYQFVETKAPIGYELDTTPVSFEIVAGETDPI-VKVTKENTLVPPTPVPPTPVPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVPVTPKKTENSEDSPKTTPIRITQSLPKTGDTNSFAGLGVILIALSLSGLLLKRK |
| 3RKP Chain:A ((168-509)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAVDLIKTGVNEKA-MAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFFV---KNSGTINEDGTITSGTV---------------VKMEVKNNEEPTIDKKI----NGKLEALPINP----------LTNYNYDIKTLIPEDIKEYKKYVVTATLDNRLVIQGKPIVKIDGAEVNANVVEVAIEGQ-KVTATVKDFTKMD------------GKKEFHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDVIGEKESKPVVVIPTT---GIIELTKIDSANKNKMKGAEFVLKDNNGKIVVVAGKEVTGV-SDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTKTSYQLLK---DPIDVKISENNQTVKLT-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 51794 for 2256 contacts (23.0/contact) +
2D Compatibility (PS) -34301 + (NN) 4264 + (LL) 21872
1D Compatibility (HY) -18000 + (ID) 5650
Total energy: 19979.0 ( 8.86 by residue)
QMean score : 0.379
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