Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATPEPKAETEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCLFCLSLLNKK
3S9G Chain:A ((277-322))
-------ESLQNMSKQ--ELIKEYLELEKSLSRMEDENNRLRLESKRLDARV-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3S9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5073 for 171 contacts (29.7/contact) +
2D Compatibility (PS) -4755 + (NN) -2914 + (LL) 5040
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -2856.0 ( -16.70 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_3S9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S9G-query.scw
PDB file :
Tito_Scwrl_3S9G.pdb
: