Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LEKLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPVRKG-KIIDLCSGNGIIPLLLSTRTEAQIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRIDKEANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKEILYGESE |
3LPM Chain:A ((5-249)) | --KLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYL-PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP-----------------------MCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKEILYG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26264 for 1764 contacts (-14.9/contact) +
2D Compatibility (PS) -22184 + (NN) 5206 + (LL) 1764
1D Compatibility (HY) -6000 + (ID) 4300
Total energy: -51778.0 ( -29.35 by residue)
QMean score : 0.206
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