Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LIMNANLEVNAELVKESYVYLLSRYLVLRQENFDTKEDKIPYNTLKHNSVSPADANFVNPNFDVVYSEAWIAVDDEHAVVLEVPEIKNRYYTVQLLDGWGEVVTNINERNFPEHPHGKFAFVKKGTNPSIPSDAIKIELPSEKVKVLLRVEQKDDPEGAVKLQKAFKFDAPDNIKIKEPLEIPHFTNAEFLLEEIYSNLEELLATYPDKMPKAAEFQDKARKVAAYI--ELGDDQKAEVRNLIVKEALPYFTNGAKGFGTQKGGWSVTYVAGAFENDILARAIINYGGIWANSIQEALYFIGQKGTDDELLTGDKIYKIHFSADELPAELANAFWSVTLYSVPDYHVIPNELNKFCINNYTGPKLSEDGSLTLYIASEKPADVDPGNWLPSKAGKEFSLNFRLYVPKKEVLEGKVFLPPLEVF |
2DG8 Chain:A ((49-110)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HFTGIEQLLREAFGRFTDHIVAVFDEHLGAAADRDEAREAVADLVHELSEDSQ---RDLVLTQEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4004 for 307 contacts (-13.0/contact) +
2D Compatibility (PS) -6654 + (NN) -6550 + (LL) 21880
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: 1272.0 ( 4.14 by residue)
QMean score : 0.391
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