Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKIPVVVSLALCFSLVSPSLYASADTITAVQITKEATTDTTEPTTIDQPSRMDNSQTAPQKMTASSSEEAATTNSTEEENTPKNNLKSTSENSKTYAELFPDVNLAKIIAKNISGTEDINAEVSEAELQTITNLVATNQNITSLTGIEHLTALENINVNNNELTTIDSLFNIPTLKSISANNNKITGNFSLVKTLPELHTLEVLGNAITELDIENQPNLVTLSADELELKKLTLKNLSQLNGLGRIASSISIDWGDLESVTLMNLPEIISVDISGNYLDSDDIHLENLPAVKNLDISSNELTRLPKINDFPLLTTINVRSNKI-------DRLESSKL--------VDVP----KLATLNADKQAVTLSKTIAAGNFTIPNNVENLAGQMVTPKIISNNGTYSDQSIAWASGELSGLSKVSYTFD-----EVINSPAI---AGKYTGTVNQPIEVKAVPV-----IVADKSVSYAPVNAKDEATFLQDIRASASENAQITSDYSEVVDFATPGDYTVTLHAKNEFDLKADPVTVVVHINDIQKPQVAVNSND-ISFEVGTELTSEVLLAKSGAVVTDLYDEAIKMEVDLSE-VDSSKLGTYEATIIAKSKSGASSDPIKLSVKIVDTEKPIIQINNPEIIIEKGSELTEGQIIDQVGITATDNYDQDLNIHMDLSKVDTSKPGSYEVTIYTEDSSGNRSETVTITVKVPEARIGKITIQYMDSENNELAESNTITGEVGETYETLAKEIEGYTLKENPANSSGVFEETRQTIQYIYVKDIINPEFPVYSENNVTPELPSNNNNSVNGSRQTPSKSVKKQSKAYSKINQMPMNLPETGDSTNLLFIFMGVLLLAGLTLSKAKRKNQ |
4L3A Chain:A ((71-497)) | -------------------------------------------------------------------------------------------------------------------------ANITEAQMDSLTYITLANINVTDLTGIEYAHNIKDLTINNIHAT----------------NYNQISG-------LSNLERLRIMGADVTSDKI---PNLSGLT-------NLTLLDLSHSAHDDSILTKIN------------TLPKVTSIDLSYNGAITDIMPLKTMPELKSLNIQFDGVHDYRGIEDFPKLNTLLAYSQTIGGKKLINSDIKSSKLTYNAENQTLYVPFSLMTERTVNYDGYVPDFVKSTASSDTYFTMNEQQVNGNRLT--ITSDGLTVSDVS----KTDFDNLEKMEYNARIDLSYQSYNTPEQFQNGGSYT--ISMPIYDHYFTVDHSLNITADSEKTYIENQLVTEATFLSDIHAKTDDGSTVTSDFADKVDFNTPGTYTVTLQSENNAGLKATPVQVNVTI----KAKTTITADEKITYKVDTSKTEAAFLADIKATTND----GTAITSDFATVVDLSKPGKYVVTLNAE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150217 for 2695 contacts (-55.7/contact) +
2D Compatibility (PS) -41717 + (NN) -2430 + (LL) 25304
1D Compatibility (HY) -21200 + (ID) 7000
Total energy: -197260.0 ( -73.19 by residue)
QMean score : 0.357
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