Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA
3F9K Chain:A ((110-203))
----------PIT-HLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIRE----QANTIETIVLMAVHCMNF-KRRGGIGDMTPSERLIN--
General information:
TITO was launched using:
RESULT:
Template:
3F9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 430 for 507 contacts (0.8/contact) +
2D Compatibility (PS) -9744 + (NN) -5194 + (LL) 1600
1D Compatibility (HY) 400 + (ID) 900
Total energy: -13408.0 ( -26.45 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_3F9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F9K-query.scw
PDB file :
Tito_Scwrl_3F9K.pdb
: