Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LEKERFRTELIGEKIGQLCKTYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYL-SSIMDLYNGEIVAYSIGEKQTQN
1AMN Chain:A ((91-143))
-------------------------------------------------------------------------SEDCLYLNIWVPSPRPKSTTVMVWIYGGG--FYSGSSTLDVYNGKYLAYT--------
General information:
TITO was launched using:
RESULT:
Template:
1AMN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2675 for 177 contacts (-15.1/contact) +
2D Compatibility (PS) -4898 + (NN) 950 + (LL) 6988
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -4135.0 ( -23.36 by residue)
QMean score : 0.107
(partial model without unconserved sides chains):
PDB file :
Tito_1AMN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AMN-query.scw
PDB file :
Tito_Scwrl_1AMN.pdb
: