Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFNKKKTIASLIVLSSLASQIALTPISALADTHDTNNIALLQNTNENVPYKYTSTLTFPTLTNQTQEDYKLEIKLALPSGMNYTDLQVSVGGEDITNQVGTTSFDNSTNTVTFKFDKVTSWDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDKAGNKSTSTGSLKPKDISAPVVKAEETEITYSPGSDVTEEQFLTDIHASVTDNYDSTISLTSNFTSAVNLAVSGDYSVNVQATDKAGNVSNTLNVTVHVSTPAPVAGANITVNHLDSNGNKIAESDTLTGVVNSNYQSESKKITGYTLETTPTNATGTFTDTPQTVDYIYKKDTVTPTPITVNPVEPVKPVNPVVNKPVTVKPANDNTNPSTSNSVEKTTYSSLPTTGDTDQSKSSTIFGALLLLISAPLLLFKKK |
2KT7 Chain:A ((34-135)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTNNFTVKVEYVDADGAEIAPSDTLTD---YHYVSTPKDIPGYKLREIPHNATGNITDTGIIVRYIYDKIIDVSYVDETG--KDLLPVVEIINSEAAVLEHHHHHH----------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 6721 for 524 contacts (12.8/contact) +
2D Compatibility (PS) -10747 + (NN) -5164 + (LL) 16580
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: 90.0 ( 0.17 by residue)
QMean score : 0.553
|
|
|