Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGLLLLMVVVLSVFGLSACGGGSSSGDKTEITYYQFSAPADGKALDEMVKEFEKQNPDIKVNVQTIAFNDYFTKLQTQIAGGDAPDAFELNYETFMQYAEKGVLADLTSYIEKDKDFDPSTLNKQAYDAFKYDGKQYGMVESFSNVVTIYNKDLFDKAGVEYPTADWTWKDEEAAAKKLTDAKNKVWGTSQPVTMNE-----FYKVAAQNGGSIFNEDLTETTINSPENVEALTHLTNEVTDSKVAPSPADLSGQLPEDLFMNGQIAMLHTGIWLFD-MFQDAPFKWDVQVEAGNTQKATHFFANG---IGVSKDSDKKEAAFKFASFMSANEEAAKIRIDNNWELPATENKEILQPYLDATPPDNREAVFESLQYMVLPPVVKDWNKISDYTNSEFEKVLNGDSTPEKALKNSEDNINKTMGFK |
| 4QSC Chain:A ((25-402)) | -------------------------------DVTLTLWSLDRDIQPAPNLIKEFNALNNGIKIEYRQLQFDDVVSESMRAYSTGNAPDIIAIDNPNHAMFASRGAFLDVTDMIAKSDVIKTENYFPGPLKSVTWDGKYFGVPKATNTIALYYNKDLFKAAGLDAAKPPQTWDELVDAARKLTNPAKNVYGISFSAKANEEGTFQFLPWAQMAGATYKN-------INTDGAVKALETWKTLLDEKLASPDTLTRSQWDSTATFNAGNAAMAISGPWEIDRMLKDAKFDWGVTLLPVPTPDAPRSSAMGDYNWAIFSKTKHPAEAFKAIEFFASKD---KDMFKNFGQLPARSDIPV-PPTGNALKDEALKTFVEQLKYAQPRGPSPEWPKISKAIQDAIQGALSGQMTPKAALDQAAEKI------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QSC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54419 for 3222 contacts (-16.9/contact) +
2D Compatibility (PS) -40325 + (NN) -21009 + (LL) 2868
1D Compatibility (HY) -14800 + (ID) 4900
Total energy: -132585.0 ( -41.15 by residue)
QMean score : 0.433
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