Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIAEQFAKPELPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKDELVEGLNAI-----GID--LIRRGETLDIPEFAKLSNFLGDFLKEK
3GRU Chain:A ((30-291))---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNK---------LDFNKVVANLPYQISSPITFKLIKRG--FDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKYH-IENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEMKKILEDFLNTNSEIKNLINEKVFKLSVKDIVNLSNEFYRFLQN-


General information:
TITO was launched using:
RESULT:

Template: 3GRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -174726 for 2071 contacts (-84.4/contact) +
2D Compatibility (PS) -26892 + (NN) -4130 + (LL) 2732
1D Compatibility (HY) -18400 + (ID) 4650
Total energy: -226066.0 ( -109.16 by residue)
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_3GRU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GRU-query.scw
PDB file : Tito_Scwrl_3GRU.pdb: