Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPDY-------------DELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQVQNGVSSFSVIISLDKTDDLKAGM-TADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVK-KFVETGLHNEDNIEITKGVKKGEKVI------------LPTQETSTVPGAPS-- |
| 4KKU Chain:A ((23-296)) | YRFPVIAMKVKKGILSDYLSLNGDVDTKVKADIFPDAVGKITSLRIKLGA-YVQKGQIVATLDPKSPVRAPISGYILNITKKIGETVNPQSNIAVVGRIDTKQILTYVSEKYISNIKVGNDAIIEVGAYSNEKFKAKVSEISPILDSKSRTIEVYLTPI-GSNLDKLIIGMFSKIKLITKRFKDVIKISREAVVEREGKKFVFKVDLES-----KSVQMLPITVLFEIDNIVALSGEVEENDLIVVEGMSALSNGSLINLVDTKEGLSAESNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25918 for 1335 contacts (-19.4/contact) +
2D Compatibility (PS) -23703 + (NN) -3677 + (LL) 156
1D Compatibility (HY) -2800 + (ID) 1950
Total energy: -57892.0 ( -43.36 by residue)
QMean score : 0.457
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