Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
2BEO Chain:B ((1-236))
-NAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSS-----SAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
General information:
TITO was launched using:
RESULT:
Template:
2BEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148458 for 1726 contacts (-86.0/contact) +
2D Compatibility (PS) -24889 + (NN) -6469 + (LL) 400
1D Compatibility (HY) -38400 + (ID) 11550
Total energy: -229366.0 ( -132.89 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_2BEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BEO-query.scw
PDB file :
Tito_Scwrl_2BEO.pdb
: