Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSERSMKRLMKGAAWLTAASLISKILSAIYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLA---LGGFPVVISKMLAEAEGDVRRQQIIMRAVSRMLRIVSIVIFAFLFLFANLIAIMMG-DP----ALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVEQIIRVAIILIGAGLALHFNFDLYDAGSMAMSGAFFGGVSGIFILRH-FYNKKVRLGEGIQPAVFTNKEEKVGIGRTFLRQSVAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGVYDRGQPILQLGLVISTGLALALVPMITAARVQGQQKELKRSVLLAIKITLILSGAETIGLIVIMRPLNQMLFQTPD-----GTFVLQLFMPAVFLSSLIIMLSSILQGFGKIAVPAVGVGIG-LIVKWVTGGILIP--RLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTMLFRLVAALVLMAVFPCLFEWLAPLDTRLGSAFQAIVSALVGGGIFLVFALRYKLLGPKDFVFLPFGSKLLALSKLVARK |
| 3W4T Chain:A ((14-449)) | --GDPKKAIVRLSIAMMIGMSVQTLYNLADGIWV-SGLGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDK--EGADNVAVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVELAIEYARVLLAGAFIIVFNNVGNGILRGEGDANRAMLAMVLGSGLNIVLDPIFIYTL-------GFGVVGAAYATLLSMVVTSLFIAYWLFVKRDTYVDITL----RDFSPSREILKDILRVGLPSSLSQLSMSIAMFFLNSVAITAGG---------ENGVAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTY---VIKGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTLVMQVGFAYIFVHYTTLGLRGVWIGIVIGNMVAAIVGFLWGRMRIS--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -385368 for 3594 contacts (-107.2/contact) +
2D Compatibility (PS) -41922 + (NN) -5102 + (LL) 9456
1D Compatibility (HY) -13600 + (ID) 2850
Total energy: -439386.0 ( -122.26 by residue)
QMean score : 0.378
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