Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKAKSKVARIENRYIKDTATMKKTRSRRRIALFRRLAFMAIIFAVVGGLLT-ITYTKQVLTLKEKKEKQVQVDKKMVAMKDEQDSLNEQIKKLHNDDYIAKLARSEYYLSKDGEIIFNIPEENSKQKE
2ZQM Chain:A ((37-103))
------------------------TEAKKALDEIESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKIET---LEVRLNALERQEKKLNEKLKEL-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1097 for 310 contacts (-3.5/contact) +
2D Compatibility (PS) -7467 + (NN) -3251 + (LL) 4684
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -11731.0 ( -37.84 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_2ZQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZQM-query.scw
PDB file :
Tito_Scwrl_2ZQM.pdb
: