Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGNKLQGKVTGITNFGAFVELEGGKTGLVHISEVADNYVKDINDILTVGDEVTVKVMNIGDD-GKIGLSIRKAVDRPDRPEKSYDRKPKYNKKPAGNYVKPAESFEDIMSKFLKDSDERLTTIKRQTESKRGGRGAKRG
2K4K Chain:A ((5-94))
--FEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINEHLSVGDEVQVKVLAVDEEKGKISLSIRATQAAPEKKE-SKPRKPK--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K4K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55200 for 590 contacts (-93.6/contact) +
2D Compatibility (PS) -9540 + (NN) -2270 + (LL) 2348
1D Compatibility (HY) -9200 + (ID) 2450
Total energy: -76312.0 ( -129.34 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_2K4K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K4K-query.scw
PDB file :
Tito_Scwrl_2K4K.pdb
: