Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILVIDVGNTNCTVGVYEKQKLLKHWRMTTDRHRTSDELGMTVLNFFSYANLTPSDIQGIIISSVVPPIMHAMETMCVRYFNIRPLIVGPGIKTGLNLKVDNPREIGSDRIVNAVAASEEYGTPVIVVDFGTATTFCYIDESGVYQGGAIAPGIMISTEALYNRAAKLPRVDIAESSQIIGKSTVSSMQAGIFYGFVGQCEGIIAEMKKQSNASPVVVATGGLARMITEKSSAVDILDPFLTLKGLELLYRRNKPTTEK
2H3G Chain:X ((1-253))
MIFVLDVGNTNAVLGVFEEGELRQHWRMETDRHKTEDEYGMLVKQLLEHEGLSFEDVKGIIVSSVVPPIMFALERMCEKYFKIKPLVVGPGIKTGLNIKYENPREVGADRIVNAVAGIHLYGSPLIIVDFGTATTYCYINEEKHYMGGVITPGIMISAEALYS-------IEITKPSSVVGKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAKLISEESNVIDVVDPFLTLKGLYMLYERN------
General information:
TITO was launched using:
RESULT:
Template:
2H3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -204771 for 1988 contacts (-103.0/contact) +
2D Compatibility (PS) -26602 + (NN) -12558 + (LL) 784
1D Compatibility (HY) -33200 + (ID) 7450
Total energy: -283797.0 ( -142.76 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_2H3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H3G-query.scw
PDB file :
Tito_Scwrl_2H3G.pdb
: