Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MICQRCGENKAVIALQQLNELGKVESLYLCENCATDEALSSEKDLVKAMDTFSEVALDFLTLLQKEENTQKEVVCENCQLSFEEFLK-------------TNRVGCPECYSAFEAQLVPIIGRVQNGYKKHIGK-------VPAEVERAEGVQNEISRLQEKLAKLVKNEEFEEAAVVRDEIKALKAGGEDK |
| 3LPX Chain:A ((197-316)) | -------------------------------------------------------------------------LIDNSELTFEEILEHIPGPDFPTAGIISGRAGIEEAYRTGRGK-IKIRARASIDVHETTGKETIIVHELPYQVNKA--------RLIEKMAELVKDKRLEGISALRDE----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5735 for 326 contacts (-17.6/contact) +
2D Compatibility (PS) -8176 + (NN) -415 + (LL) 7580
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -12596.0 ( -38.64 by residue)
QMean score : 0.409
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