Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKAKRTTKFVCQACGYESAKWMGKCPNCNEWNQMVEALEPSKKSRSA-FNHTGE--PSKATPITQIA--SETEKRVETNMPELNRVLGGGVVPGSMVLVGGDPGIGKSTLLLQVSAQLT----------------LTNKKVLYISGEE--SIKQTKLRAERLQVS----GDNLYVYAETNLE-------AVQETIDF-VKPDFVVIDSIQTVYHSDVTS---AAGSVSQVRECTATLMRIAKMQNIAIFIVGHVTKEGA---IAGPRLLEHMVDTVLYFEGERHHAYRILRAVKNRFGSTNEMGIFEMRDVGLVEVANPSEVFLEERLEGASGSTVVASMEGTRPVLVEIQALVSPTMFGNAKRMATGIDYNKVSLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEPAVDLAVAVSVASSYRDKPTRSTDCFIGELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPKNNEGNWKIPKDVQVVGVETIGEALKKALPD |
| 2I1Q Chain:A ((15-321)) | -------TAEKLVEAGYIDFMKIATATV----GELTDIEGISEKAAAKMIMGARDLCDLGFKSGIDLLKQRSTVWKLSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERIMQMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTNQVSAK--AEQAIGGHIVGHAATFRFFVRKGK-GDKRVAKLYDSPHLPD-AEAIFRITEKGIQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132668 for 1981 contacts (-67.0/contact) +
2D Compatibility (PS) -28361 + (NN) -11936 + (LL) 14344
1D Compatibility (HY) -5200 + (ID) 2550
Total energy: -166371.0 ( -83.98 by residue)
QMean score : 0.491
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