Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRLKEDIATIIKNDPATKSFFDAFLTNPGLHALWWHRVANFFYRHKMVLFGKVLSQNARFWTNIEIHPGATIGRRLFIDHGAGIVIGETAEIGDDVTIFHGVTLGGTGKDCGKRHPTVGDGALVSAGAKVLGPVEIGAGARIGAGAVVLKDVPPGATVVGIPAKVVRLNGRTVGHAVPKMDELTLRIAELENIVEKLLKEKE
4HZD Chain:A ((91-260))
----LRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPARIIGETGCT------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HZD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116610 for 1402 contacts (-83.2/contact) +
2D Compatibility (PS) -18112 + (NN) -8174 + (LL) 3188
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -158658.0 ( -113.17 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_4HZD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HZD-query.scw
PDB file :
Tito_Scwrl_4HZD.pdb
: