Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIAKFFRNVSSEMHKVTWPTRKELLTYTVTVVITVVLFALFFMLIDFGIEQIIKLIV------
3DIN Chain:D ((10-65))
---------EVIAEAKKISWPSRKELLTSFGVVLVILAVTSVYFFVLDFIFSGVVSAIFKALGIG
General information:
TITO was launched using:
RESULT:
Template:
3DIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15190 for 193 contacts (-78.7/contact) +
2D Compatibility (PS) -4969 + (NN) -838 + (LL) 1100
1D Compatibility (HY) -6400 + (ID) 800
Total energy: -27097.0 ( -140.40 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_3DIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DIN-query.scw
PDB file :
Tito_Scwrl_3DIN.pdb
: