Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGRKKVSIPEEYQRFNQFSADKERLLCIGAFTT------ECKHKVETKLDGSNKMLKLYYPKNQA-------AKVM-----KYWLPMFGINDGYSAVEVITNWIQANDYSGMIAANTTNKVIRIVTK-------ASQKEGLDETSLVAAANKVKTYGAFDLDRLGYIVRVCYSLDLI-NEEQAWDFFEELWGAATMHFDDWDEYCVSYLNGEEGLDTNWYSDGVKAYVALRKDAASLLNKYQLKN |
| 3PQA Chain:A ((128-295)) | ----------------------REPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIV--HHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMF------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21753 for 923 contacts (-23.6/contact) +
2D Compatibility (PS) -14311 + (NN) 1976 + (LL) 4780
1D Compatibility (HY) -8400 + (ID) 2000
Total energy: -39708.0 ( -43.02 by residue)
QMean score : 0.139
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