Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVDFGSKLLIESFELET-----KIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDNV-TANDYQAIISNPPIRAG----KKIVHAILEGAYDHLQETGELWIVIQKKQGGPSAEKKMEEVFGNVETVAKDKGYFIFKSVKN
3DMG Chain:A ((197-372))
---------------------------EYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEANAL-KAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKY---EPLLEEKFGAFQTLK-VAEYKVLFAEK-
General information:
TITO was launched using:
RESULT:
Template:
3DMG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58463 for 1404 contacts (-41.6/contact) +
2D Compatibility (PS) -18088 + (NN) -8150 + (LL) 1468
1D Compatibility (HY) -10400 + (ID) 2150
Total energy: -95783.0 ( -68.22 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3DMG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DMG-query.scw
PDB file :
Tito_Scwrl_3DMG.pdb
: