Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTLKGK--------------------YNEAKVFTDNVDDNTIGQIITLCNQPFAKDSKIRIMPDTHGGKGCVIGTTMTIQDK---IVPNLVGVDIGCGLYVVK--LKPGKLKMDFDKLDKVIRERVPSG------SKTHDKPVDEFDLEGIVAPIHHGW------------------------------VARSIGTLGGGNHFIEVNQGSDG---------------IYLVIHSGSRVLGKEIAEYHQEVAYKRLDILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYDLSYVT--GVDLKNYLNDMEIAQKFAARNRYVMAQIILKAMKW--------DKAVVSAFDCVHNYIDIEHNML----------RKGATSA-------------QLGEQIIVPLNMREGSILATG--KGNADWNYSAPHGAGRMLSRSKAKAQISLESYQAAMKD---VWTTSVSKKTIDEAPKAYKSAKQLLADVEDT--MEIQEIIKPLYNFKA |
| 1UC2 Chain:A ((2-481)) | VVPLKRIDKIRWEIPKFDKRMRVPGRVYADEVLLEKMKNDRTLEQATNVAMLPGIYKY-SIVMPDGHQGYGFPIGGVAAFDVKEGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDGAKWAVDNGYGWERDLERLEEGGRMEGADPEAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDKIFDPEVAKAYGLFEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPW---------------------------PDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEGDLGMDIVYDVAHNIGKVEEHEVDGKRVKVIVHRKGATRAFPPGHEAVPRLYRDVGQPVLIPGSMGTASYILAGTEGAMKETFGSTCHGAGRVLSRKAATRQYRGDRIRQELLNRGIYVRAASMRVVAEEAPGAYKNVDNVVKVVSEAGIAKLVARMRPIGVAKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117819 for 3263 contacts (-36.1/contact) +
2D Compatibility (PS) -39930 + (NN) -9935 + (LL) 1768
1D Compatibility (HY) -17200 + (ID) 4900
Total energy: -188016.0 ( -57.62 by residue)
QMean score : 0.449
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