Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LITHVIWDMGETLNTVPNTRYDHYPLDTYPEVVLRKDAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNELQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERQPLVAPPFVIPVWDLADVPEALLLLKKISS
3IB6 Chain:A ((2-180))
-LTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKKIS-
General information:
TITO was launched using:
RESULT:
Template:
3IB6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109416 for 1506 contacts (-72.7/contact) +
2D Compatibility (PS) -19623 + (NN) -15138 + (LL) 148
1D Compatibility (HY) -26000 + (ID) 8700
Total energy: -178729.0 ( -118.68 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3IB6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IB6-query.scw
PDB file :
Tito_Scwrl_3IB6.pdb
: