Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQQKKIQILKDLVNIDSTNGHEEQVANYLQKLLAEHGIESEKVQYDLDRASLVSEIGSSNEKVLAFSGHMDVVDAGDVSKWKFPPFEATEHEGKLYGRGATDMKSGLAAMVIAMIELHEEKQKLNGKIRLLATVGEEIGEL-GAEQLTQKGYADD--LDGLIIGEPS-----GHRIVYAHKGSINYTVKSTGKNAHSSMPEFGVNAIDNLLLFYNEVEKFVKSIDATNEILGDFIHNVTVIDGGN-QVNSIPEKAQLQGNIRSIPEMDNETVKQVLVKIINKLNKQENVNLELIFDYDKQPVFSDKNSDLVHIAKSVASDIVKEEIPLLGISGTTDAAEFTKAKKEFPVIIFGPGNETPHQVNENVSIGNYLEMVDVYKRIATEFLS |
| 4O23 Chain:A ((5-380)) | -TETQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEELHFG-DTKNIWLRRGT-KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEV--WDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDK----HGVQYDLQWSCSGQP-FLTQAGKLTDVARAAIAETCGIEAELSTTGGTSD-GRFIKAIAQ-ELIELGPSNATIHQINENVRLNDIPKLSAVYEGILARLLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74349 for 3174 contacts (-23.4/contact) +
2D Compatibility (PS) -38947 + (NN) -18017 + (LL) 1140
1D Compatibility (HY) -19200 + (ID) 5550
Total energy: -154923.0 ( -48.81 by residue)
QMean score : 0.455
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