Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDPYTYHLYYGDEIGSPGTALTFFEVPNMAKNHPSRNAISGLSLRVPSDEALHYWDKRLDEHRIFHSKPIDQFGRKIIRLKDTDGLPVNLISDETSTQVTEVTPWEDSLVPAEYAIRGLGPVRFSVFKKEKTDRLLTKILGFERIGAYEDDDKLVTVFKTGNVGLGGEVHVESRPDLEQGNLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDRFYFHSLYFRESNGILIELATDEPGFQTDFTKEH-GTYVDLPPHLEERREDILAHLKPLDTDK |
| 1ZSW Chain:A ((11-338)) | VDLGTENLYFQSNAMYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNGEKV-EHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ----EAIFQSIKGEAFGEIVVKYLDG-PTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDGPGFTVDGDVEHLGEKLDLPPFLEDQRAEIEANLAPIEEK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130665 for 2629 contacts (-49.7/contact) +
2D Compatibility (PS) -34258 + (NN) -17640 + (LL) 520
1D Compatibility (HY) -22400 + (ID) 6450
Total energy: -210893.0 ( -80.22 by residue)
QMean score : 0.599
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