Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------MKRIVKIFLHYLLGILGIILISCVPAIFSKVTSWSSSTYWEALKSIFTAIFHPTKWEISYQGSAEVFHVSLADFITGPYFYSMKIIVASLVISALIAYLLVIATFRG----PKWLRRGLSGFLSILQAFPDFSFIFLIQMAVVYIYQQTGVFTLNFYSLNGEQIYAAPIVCLSII-----------------PTVLFYKMMMLLMENEW------------QADYIQLARGKGLNDKAILLRHATPNM------------MQSLFYQSKTIV--WFILSAYLV----VEFLFGIEGV----------LYYLLAGFSPLNI----FLVLALVFTPFYFFYTLIDLWISCGKNTESA-------NVTRIPLHWNSFQKTFKEKV--NLKSKWRNFV------------VTTG-----------QLLKRPSFSIPLVTLSILLIASLIYGLMGDKINSLKFI--------SDATGRVTDMAPFKPNAQVWLGTDQAGNSILDQLLVGIKYTLL-------IAVIIA----TLRVVIGYILA-----VPLAFFSKPRTRNFVQATADGMHYLPLSLLVFIIMVNEFISYSGVFETSLFTRITFQILIMVVIVLPITTNRI---------------SSEISQVLKK-----------EFVLS------ALVFGGNARWILTK-------------------HINPQIWSKLILIWIEQLIQTLQMFVHLAIFGIFIGGAIMGADDGMLNPAIPELSGLIANAKFVFANHQFWIILPPLVVFMILILC-------FQMMANSLLKREEDSKKA--------------------------------------------------------------------------------------------- |
| 2IPC Chain:A ((1-939)) | MLGLLRRLFDNNEREIARYYKQVVEPVNRLEAEVEKLPDLAAAYRELKEKHEKGASLDELLPMAFALTRESAKRYLGMRHFDVQLIGGAVLHEGKIAEMKTGEGKTLVATLAVALNALTGKGVHVVTVNDYLARRDAEWMGPV-YRGLGLSVGVIQHASTPAERRKAYLADVTYVTNSELGFDYLRDNMAISPDQLVLRHDHPLHYAIIDEVDSILIDEARTPLIISGPAEKATDLYYKMAEIAKKLERGLPAEPGVRKEPTGDYTVEEKNRSVHLTLQGIAKAEKLLGIEGLFSPENMELAHMLIQAIRAKELYHRDRDYIVQDGQVIIVDEFTGRLMPGRRYGEGLHQAIEAKEGVRIERENQTLATITYQNFFRLYEKRAGMTGTAKTEEKEFQEIYGMDVVVVPTNRPVIRKDFPDVVYRTEKGKFYAVVEEIAEKYERGQPVLVGTISIEKSERLSQMLKEPRLYLPRLEMRLELFKKASQKQQGPEWERLRKLLERPAQLKDEDLAPFEGLIPPKGNLRTAWEGLKRAVHTLAVLRQGIPHQVLNAKHHAREAEIVAQAGRSKTVTIATNMAGRGTDIKLGGNPEYLAAALLEKEGFDRYEWKVELFIKKMVAGKEEEARALAQELGIREELLERIREIREECKQDEERVRALGGLFIIGTERHESRRIDNQLRGRAGRQGDPGGSRFYVSFDDDLMRLFASDRVIAMLDRMGFDDSEPIEHPMVTRSIERAQKRVEDRNFAIRKQLLQFDDVLSRQREVIYAQRRLILLGKDEEVKEAAIGMVEETVASLAENFLNPEVHPEDWDLEGLKATLLDTAPQLQDFPFAELRALKAEEAVERLVEAALKAYEAREAELSPPLMRAVERFVILNVVDNAWKEHLHNLDVLRQGIFLRGYGQKDPFQEYKIEATRLFNEMVAFIKSEVAKFLFRLKVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -453528 for 4420 contacts (-102.6/contact) +
2D Compatibility (PS) -65366 + (NN) -3850 + (LL) 52
1D Compatibility (HY) 1200 + (ID) 4800
Total energy: -526292.0 ( -119.07 by residue)
QMean score : 0.132
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