Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRNYHVKFLNEKDVELAEAVCAASEDYYLIEQDKSASKSDALKIITEIPDGKTRFDKFVLAVLDENEKPIGLVDIVSDYPRKGRWFIGLLLLTPDARHNGLGKVLHQTIKEWASDGGADSLALGVLAENEKGRGFFEHLGYTKEETKQASYGGKEQEVSIFTLAIK
3EXN Chain:A ((9-150))
-VLTLDLAPVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVD---PRRRAFLLF-LGQEPVGYLDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFAAG--LDGVRRLYAVVYGHNPKAKAFFQAQGFRYVKDGG------------------
General information:
TITO was launched using:
RESULT:
Template:
3EXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61024 for 986 contacts (-61.9/contact) +
2D Compatibility (PS) -15663 + (NN) -8336 + (LL) 1860
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -90913.0 ( -92.20 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_3EXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EXN-query.scw
PDB file :
Tito_Scwrl_3EXN.pdb
: