Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNLNWAILGPGSIAHEFAEGMRGMNR---EIYAVGARSLEKGQAFASQYGIENVYDDFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSKELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKIIQVAFGSAKEKDPKNRFYNMDLAGGALLDIGTYALSFARYFL-SETPDEVLTTMKKFETGVDEQSGILLKNNEEELAVVSLSFRAKMPKRGVIACEEGFITVDEYPRASRATVTHTATGKVEEIEVG-----ETSKALEYEITAMEESVATGE----NMTYQLTNDVIAIMSDVRTQWGIKFPFEK |
| 2O4U Chain:X ((2-332)) | --ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGDLRVARAEFG--KNLTHVPRAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRHETGVDDTVTVLLQYPGEVHGSFTCSITAQLSNTASVSGTKGMAQLLNPCWCPTELVVKGEHKEFLLPPVPKNCNFDNGAGMSYEAKHVRECLRKGLKESPVIPLVESELLADILEEVRRAIGVTFPQD- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2O4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -206113 for 2821 contacts (-73.1/contact) +
2D Compatibility (PS) -34354 + (NN) -10384 + (LL) 216
1D Compatibility (HY) -20400 + (ID) 4150
Total energy: -275185.0 ( -97.55 by residue)
QMean score : 0.574
|
|
|