Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKMRFFQSVQFKLVIMYLLLIIVAMQVIGAYFVRELEGQLEKNFQDSITNSITLLDYNAREEIIKNSDNSVKLQNDIRELLVDYSRASSNLIEVRIVDDKGKILGTSNLNNQGIVGQKSNDPLVKRTLSLGTTSEDKIYKDESNKNNRVWVNVSSIKNKGQVIGAIYLVADIESVYKQVDDITNIFITGTLIAMIITAVLGILLSRTITKPIVEMKRQAYAMARGNYSRKVKVYGVDEIGELADSFNTLTKRVQEAQAMTEGERRKLSSVLAYMTDGVIATDRRGKVILINTPAEKMLRVKHESANGRSIIDVLDIGDTYQFEDLMEVDGSLTMDRSTLDKPYVLRANFSVIQRETGFNNGVIAVLHDITDQEKVDQERRDFVSNVSHELRTPLTSMHSYLEALSDGAWEDKEIAPRFLEVTQNETERMIRLVNDLLKLSRMDGGREQLEKSFVNFTDFFNHIIDRFEMMKKET------IMFKRHIPREPVIIEIDEDKVMQVLDNIISNANKYSPDGGRISFYLKKFEDEIEVSIADEGLGVPDEDLANVFDRFFRVDKARSREMGGTGLGLAIAREVIEAHGGRIWAERNKNKGTIIKFTLPYSDLPEDDWE |
| 4U7O Chain:A ((25-263)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTEQQKIDNDRKQFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMFNYVLDRFDMILKKDDNPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFRVDK-----QGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88325 for 1577 contacts (-56.0/contact) +
2D Compatibility (PS) -24963 + (NN) -10314 + (LL) 28664
1D Compatibility (HY) -26800 + (ID) 6300
Total energy: -128038.0 ( -81.19 by residue)
QMean score : 0.602
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