Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKKTGFRSFILTILVVLSIVLSYFIWKGQPDYEAINVKEVEKTTIDKTMTTSQVFKPYKLAVNANENNYQSLDADLLNELMAQGKAFSFSEVVLASKKSSEDYEKLIHKNGTIEIIFPNNIPFSIFAQIFQVEGEGLESAFFNRIVFDINKTDTGLHSVYFTNDDQENIYQSSLQNKDIDKIEKIVKKNESKLTQNDKLISNKRNLFLSSEKTKLNRKKYIIDSLEINLFTSALFQDSGTVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTNPEDLSSVKRAGLIQDSFNFVNDHAGWTGDGAYYFTGYAAESATTNFSLFIDNLQVYNE-----NGMADISVTEGL-EAVYKYMRPFFRLDTDVPGEKKEVTLPSSYSVYSALAQNPNV-KAEEIEDIVPGYHMTRSESSGMNRLVTLEPTWLYKYHDKWFIFQPDAEKAGE |
| 2O3O Chain:A ((90-228)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEDDAQALVSSKIQDGE--KYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQI----QKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYP--L--TSTQVLAPVWRITVE--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64508 for 799 contacts (-80.7/contact) +
2D Compatibility (PS) -13282 + (NN) 1930 + (LL) 19600
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -61810.0 ( -77.36 by residue)
QMean score : 0.316
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