Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSDLTGQAITLK-----DNNKQIYSVLQTPVKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLF------DEAGQITFYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKHSGE-----TNYVLVNAKDEQVINQSENKSTTEPGAELSSRQKAK |
| 2O3O Chain:A ((14-252)) | --------------------------------------KNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQI-QKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEY-EKEKKTVQEYFTVNALESTILDT-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66898 for 1580 contacts (-42.3/contact) +
2D Compatibility (PS) -23324 + (NN) -3604 + (LL) 4336
1D Compatibility (HY) -16800 + (ID) 2900
Total energy: -109190.0 ( -69.11 by residue)
QMean score : 0.524
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